Quantum mechanics and Foosball? Credit: RickyDavid.

When I began this story, it seemed pretty simple. I'd heard that scientists at Lawrence Berkeley National Lab were working to mimic photosynthesis and create a man-made version of the process that could supply us with renewable energy.

The premise is to create a "closed-loop" energy system. Artificial leaves would use water, sunlight and carbon dioxide as inputs to create fuels like butane. Those fuels would be used for transportation or fuel cells. And by burning those fuels, we would produce carbon dioxide. The cycle goes on from there.

I never thought that quantum mechanics would enter the picture. That's what I discovered at the UC Berkeley lab of Graham Fleming. He says we have a lot to thank photosynthesis for. It produces the oxygen we breathe and is the basis for the entire food chain on the planet.

Fleming's lab is dedicated to understanding how photosynthesis works so well. And one of the things they've found is that plants are somehow tapping into quantum mechanics to improve their efficiency. It's pretty complicated – but with the help of the folks in Fleming's lab, they helped me understand it through, of all things, Foosball. Here's an audio version of it to help you out.

Listen to the Building an Artificial Leaf radio report online, and listen to our Web Extra: Photosynthesis and Foosball.

Doug Nomura in action on the Bay Trail.

Something about San José photographer Doug Nomura’s pictures of birds in flight, or attempting to get off the ground to fly, grabs you.  I think it’s the sheer energy and effort that the photos convey.

It’s especially timely to be broadcasting our profile of Nomura as the Your Photos on QUEST (please link to our YPOQ8 segment) 2-minute segment on our Oct. 13 television episode, since the Bay Area is inundated with migratory birds starting in October.  The Bay Area is on the Pacific Flyway, a major north-south route of travel for migratory birds in the Americas, extending from Alaska to Patagonia.  As a result, close to 700,000 ducks are usually counted in the San Francisco Bay and the Sacramento-San Joaquin River Delta during October, said John Takekawa, research wildlife biologist with the US Geological Service. Raptors like hawks and falcons also stop over in the Bay Area in fall and winter.

Doug Nomura looks forward to the beginning of the migration in October because it multiplies his opportunities to photograph birds in flight.  He stalks his subjects along the Bay Trail, a shoreline trail that will eventually hug the entire circumference of the San Francisco Bay.  When the Bay Trail is complete, it will be 500 miles long.  Currently, the public can enjoy almost 300 miles of paths.  Nomura, whose day job is as a computer network security specialist, is an avid fan.  “This allows me to turn the cell phone off and go out there for a couple of hours,” he said.  “It’s some of the best therapy one can give oneself and it doesn’t cost anything.  I’d like my photographs to inspire people to visit the Bay Trail to look at the wildlife and appreciate what we have in our backyard.”

The beautiful San Francisco Bay.

Over the last two weeks I have had the opportunity to preview the film "Saving The Bay," as I prepare educational Viewing Guides for teachers. Even though I have called the Bay Area home for many years, I realized through watching this documentary that there is so much I do not know about my own backyard—the Bay. In addition to learning from "Saving The Bay," it has inspired me to explore new areas and to get more involved in restoration efforts. I am hopeful that students will also be inspired by this film and encouraged to go outside and enjoy our magnificent home.

"Saving The Bay," a film by Ron Blatman, is a four-part documentary chronicling the history of the San Francisco Bay. From the formation of the Bay itself to the formation of Save The Bay, this beautiful film tells the story of the Bay through striking images and knowledgeable voices. Complete with impressive animation, historical video footage and a lovely musical score, "Saving The Bay" offers an expansive overview of a vibrant San Francisco Bay region and how it came to be what it is today.

The first episode, "Saving The Bay," details the history of the San Francisco estuary and the first people to inhabit the region. "Harbor of Harbors", tells the story of San Francisco Bay’s dramatic transformation following the California Gold Rush. The third episode, "Miracle Workers," focuses on the engineering and industrialization of the Bay. "Bay in the Balance" shares how the Bay was saved and plans for the Bay’s future.

"Saving The Bay" is a great educational tool for teachers and alternative educators alike. This film presents a plethora of information in an engaging manner and covers many California State Science and Social Studies Standards for grades 4-12. Furthermore, upon watching parts or all of "Saving The Bay," students will develop a deeper understanding of their local environment and perhaps be motivated to participate in the on-going effort to save the Bay.

The first two episodes premiere on KQED Channel 9 on Thursday, Oct. 8 at 8pm. Click here to find additional air times/dates and to find out what else "Saving the Bay" has to offer.

Abandoned Boats

America’s Last Whaling Station (TV)

Cleaning Up Hunter’s Point

Elk Return to the Bay Area

From Salt Ponds to Wetlands

Fur Seal Pup Rehab

Ice Age Bay Area

Journey to the Farallones

Legacy of Salt

Mercury in the Bay – Part 1

Mercury in the Bay – Part 2

Redesigning the Bay

Rising Seas

San Francisco Bay Debris

San Francisco Bay Invaders

Sea Lion Rescue

Sharks of the San Francisco Bay

The Return of the Canal

Waste Water Woes: Sewage Spills in the SF Bay

Web Extra: Citizen Science – Mud Snails

Wetlands Time Machine

What’s Killing the Sea Otters?

I often look at the chemical ingredients in what I buy. I shop at farmers markets for organic produce and use green cleaning supplies. So, it caught me off guard when a friend remarked, "you are so aware of what you eat, why aren't you just as curious about what you drink?" Well, we drink organic coffee but not organic wine. I was worried about sacrificing taste and I just didn't think most vineyards were heavily sprayed with pesticides. Then I learned that wine grapes are the second most sprayed crop in the state. This didn't seem like it could be that good for the farm workers, the Earth, or the consumer. Several studies have found trace amounts of pesticides in wine. They may be at extremely low amounts, but what kind of impact could pesticide residues have overtime?

Armed with a new green cause, I set out to find more information about eco-wines. I learned that organic wine is just one type of green wine — there is also wine made with organic grapes. It turns out I had been drinking some of these wines and enjoying them. The thing is, you can't call it "organic wine" if the wine has added sulfites, a naturally occurring compound. Most winemakers add sulfites to help preserve the wine and make it more stable. If a wine is made from organic grapes but contains sulfites, the world "organic" can only be mentioned as part of the ingredient claim on the back of the bottle. No wonder I didn't know I was drinking wine farmed organically.

It turns out northern Sonoma County and Mendocino county are hotbeds for green wine. In the course of reporting this story, I visited several of these wine makers. Bonterra Vineyards, below Ukiah, has been farming organically since 1987 and now farms one of their ranches, McNab, biodynamically. Their red blend is nicely balanced and tastes very good.

Biodynamic is a novel form of organic farming practice with its roots in France. A biodynamic vineyard is a self-sustaining ecosystem — making organic compost, removing chemicals from the soil and farming with the cycles of the Earth.  Biodynamic has its own international certification. (Here is a list of their certified wines). Just up the 101 from Bonterra is Parducci Wine Cellars. This family run company is farming organic grapes and in some cases, biodynamically. Parducci also claims to be one of the most sustainable wineries in the country.

Sustainable is a squishy term. Sustainable wineries may be running off solar power or doing creek restoration to save spawning salmon but they are not necessarily organic and they are not certified. However, the California Sustainable Winegrowing Program is working toward an industry certification. The idea is to raise the entire industry's practices and help vintners make more eco-friendly choices that often include using less chemicals in the vineyards.

Back to sulfites. This ended up being the main reason for the stigma still associated with green wine. Twenty years ago, green wines were uneven and there were not that many choices. Now, several of these eco-wines are winning high points from the industry. Organic wine can only contain naturally occurring sulfites, under 10ppm. Wines farmed organically must keep the added sulfites below 100ppm. Conventional wine can contain sulfites as high as 300ppm. When I was reporting this story, several folks asked me if I was going to explain why they get headaches from red wine. Isn't it the sulfites? Actually, it is not known why some people get headaches from drinking red wine. It could be the histamines. It doesn't look like it's the sulfites. Less than 1% of the population, according to the FDA, is sensitive to sulfites. The reaction is a respiratory one.

Anyway, if you enjoy wine, I encourage you to think beyond red and white but to consider green, too. To find out more, listen to our radio story and check out our links. Also, green wine pioneer, Paul Dolan together with Parducci has created a green wine handbook which is very helpful.

Listen to the The Politics of Green Wine radio report online.

And old, 19th Century windmill in contrast to wind turbines today.

Last summer I visited the Netherlands, the original home of the windmill. Surprisingly, I saw hardly any of the quaint structures we associate with Dutch wind power. One hundred years ago Holland had about 10,000 wooden windmills dotting its landscape. Today, barely 10% remain. What I saw instead were high tech wind turbines, white and spare and gracefully generating electricity with wind from the North Sea. Many view these modern day towers as an eyesore, but I see them as a sign of hope. Like giant flowers across a landscape, they symbolize for me a clean energy future. But wind power, and solar, have a handicap that fuels claims that renewables will never be more than a small percentage of U.S. power. These energy sources can't be counted on when night falls or the wind subsides. Their inconsistent and therefore unreliable nature poses a problem for a world with an enormous appetite for electricity. If only excess power could be stored on a grand scale, it might solve many of our energy problems.

It isn't that electrical energy isn't currently storable, but as Andrew Tang, Senior Director of PG&E’s Smart Meter program points out, the current generation of batteries can’t store electricity at a price that's cost effective. But both he and Steve Berberich from California System Operators were optimistic about future storage possibilities. Tang described an experimental project that uses a sodium sulfur battery the size of an 18-wheeler trailer. The battery would be located next to a substation, or somewhere in the network, and its stored power would be used during times of peak demand. He also talked about the future of plug-in electric cars whose batteries could both store energy and in theory put it back onto the grid when the car's not in use. Steve Berberich envisioned several possibilities for storing excess power. He proposed converting it to hydrogen, which could be burned in a gas plant or could be used in a fuel cell. And he suggested using power to compress air, which could be injected into the ground and called upon when the wind's not blowing and the sun’s not shining.

Whatever the final solution to storage, you can guarantee it will be a game changer in the renewable power industry. No longer will wind and solar be looked upon as unreliable. Hopefully this missing puzzle piece will go a long way towards helping us detach from our dependence on fossil fuels. But we’ll still be left with the challenge of getting all that clean, green energy onto the power grid. And you can be sure that environmental concerns, zoning, aesthetics, and cost will undoubtedly be cantankerous issues for years to come.

Watch the Climate Watch: Unlocking The Grid television story online.

Hydrogen is not exactly a fuel. That is, we don't burn it to make energy. It's used more as a medium for storing and transporting energy.

The science of hydrogen fuel cell systems is based on a simple concept. When you combine hydrogen with oxygen, energy is released. You get electricity. What makes it such a clean technology is that the byproducts of that chemical reaction are just heat and water.  So when a fuel cell takes hydrogen from a fuel tank and combines it with oxygen in the air, it produces electricity and emits only a wisp of heated water vapor from the tailpipe.

Hydrogen is combustible (remember the Hindenburg?), and needs to be handled carefully. However, there are easy ways to demonstrate electrolysis, which breaks water apart into oxygen and hydrogen, and the opposite process of joining those chemicals. In fact, you could make a type of fuel cell in your kitchen, with a popsicle stick, battery clips, Scotch tape and a few other household products. You do need one item that can't be found in your kitchen: platinum wire or platinum-coated nickel wire.

Hydrogen is the most abundant element in the universe. And hydrogen fuel cell conversion is a squeaky clean technology. But the production of hydrogen for use in fuel cells — that can produce a lot of carbon dioxide. In fact, most hydrogen is currently made by stripping, or re-forming, natural gas. That's one of the ongoing criticisms of fuel-cell technology, that it generates greenhouse gas emissions just to get the hydrogen in the first place.

Fuel cells also can store energy generated by solar-powered electrolysis, as well as similar energy generated by wind and hydropower. That's the kind of hydrogen generation that advocates hope to eventually use in fuel cells. But being able to store energy also makes it extremely attractive to harnessing wind, solar and hydropower.

For example, California could generate a lot of wind energy at night, but since electricity has to be used right away, that nighttime, offpeak energy is less valuable. But if it could be stored in a fuel cell through the electrolysis process, that would make it much more lucrative.

Listen to the Where's my Hydrogen Highway? radio report online, and watch our Web Extra Slideshow.

The House version comes from Democrats on the House Committee on Energy and Commerce. If it passes, a consumer would get a $3,500 voucher for trading in a truck with 15 miles per gallon in exchange for buying a new truck that gets 16 miles per gallon – a one MPG difference. (If the new truck got 17 miles a gallon, the consumer would earn $4,500). That's why environmentalists complain that the legislation is more about stimulating car sales than it is about getting gas guzzlers off the road.

The Senate version proposed by U.S. Senators Dianne Feinstein (D-Calif.), Susan Collins (R-Maine), and Charles Schumer (D-N.Y.), puts the bar a bit higher. In order to qualify for the $3,500 voucher, that same replacement truck would have to get 20 MPG – five miles per gallon more than the old truck. (An improvement of seven miles per gallon would earn the consumer a $4,500 voucher.)

Interestingly, this is a compromise even for Senator Feinstein herself. Check out her original, more stringent, Cash for Clunkers bill here. Proposed in January, it required stricter efficiency from the replacement vehicle, and would have allowed consumers to use their vouchers for used cars, or for public transit. Those conditions were junked, presumably, because they don't stimulate new car sales.

This article from the Christian Science Monitor, takes the number crunching even farther. Among the details worth considering is the "carbon cost" of making all these new vehicles that consumers will be enouraged to buy, should C4C pass: between 3.5 to 12.4 tons of CO2 per vehicle, according to a Duke economist.

Listen to the Cash for Clunkers radio report online.

Each year the Marine Mammal Center treats somewhere between 600-1000 animals, including California sea lions, Pacific harbor seals, Northern elephant seals, and steller sea lions. About half of them are treated successfully at the center and released into the Pacific. The other half either die naturally or have to be euthanized.

Most of them end up at the center's hospital after passersby spot the animals on the beach and sense something’s wrong. (The Marine Mammal center responds to calls anywhere between Mendocino and San Louis Obispo Counties — some 600 miles of coastline.) Some problems are human-caused, like boat-propeller injuries or ingested fishing nets and hooks. Other times, it's cancer, domoic acid poisoning, or leptospirosis. Sometimes, it's hard to tell exactly what happened — hence the need for necropsies.

On the day that Quest intern Jennifer Skene and I visited the center, veterinarian Nicola Pussini performed two necropsies, both on sea lions. One animal seemed to have died from a tumor underneath his fin; the other was a suspected domoic acid intoxication.

Each necropsy takes about an hour and a half. First Pussini measures the animal, then he slices it open and inspects every part, from tongue to tail. He inspects the teeth, pulls out all the organs, checks to see how much fat the animal has. The data, along with tissue samples, are archived and shared with other research institutions. This is the kind of basic research that Marine Mammal Center staff cite when people ask why they devote so many resources (most of it from private donations) to animals whose populations are neither threatened nor endangered.

I should mention that I didn't exactly see this entire process firsthand. Let's just say that after my first strong whiff of sea lion intestine, I felt a compelling need to go check on things outside the necropsy room. Luckily for me, Jennifer has the stomach of a true scientist and managed to both hold the microphone and take photos. Luckily for you, we’re sparing you her gorier shots.

Listen to the Sea Lion Rescue radio report online, and watch our photo slideshow.

There is no proven cure for Sudden Oak Death. But that doesn't mean you can't find people selling cures.

In fact, the Internet is full of theories – and their related products – that explain how to treat Sudden Oak Death. The problem with them, says UC Berkeley researcher Matteo Garbelotto, is that they don't work. And in fact, he adds, they could actually harm people's backyard oak trees.

One of the most popular treatments says that part of the problem with oaks is that they're weakened by acidic soils (presumably from acid rain), and the theory is that heavy doses of calcium in the soil could restore natural balance and strengthen trees against the Sudden Oak Death pathogen. In hopes that the theory might bear fruit, the Garbelotto lab recently tested it.

The study found that it did nothing to stop the Sudden Oak Death pathogen. In fact, Garbelotto said, it's like giving a glass of orange juice to someone with a terminal disease. And in some cases, he added, it could have a detrimental effect.

A different Garbelotto study showed that a phosphonate fungicide, brand-named Agri-Fos, can prevent the onset of Sudden Oak Death, for a period of about two years. This is the only product on the market that is effective, he said – not as a cure, but as a two-year preventative.

Some people who love their oak trees decide to try both treatments, Garbelotto said. And since the phosphonate that does work is acidic, and the calcium treatment that doesn't work is basic, then you could end up inhibiting the treatment that actually works. That is, if you use both treatments, he said, the calcium could actually negate the positive effect of the phosphonate.

From 10 a.m. to noon on Sunday, May 16, Garbelotto will lead a "Sudden Oak Death Blitz" at the East Bay Parks Botanic Garden in Berkeley's Tilden Park. The event, sponsored by the California Oak Mortality Task Force, trains participants to spot vegetation infected with P. ramorum and collect samples for testing. The training is useful for homeowners who want to monitor their own trees for Sudden Oak Death.

Listen to the Sudden Oak Death radio report online.

More than 20 million gallons of raw sewage spilled into California waterways last year, according to the state Department of Water Resources Control Board. That's not counting the partially treated sewage that makes its way into our water from overflows and sewer system malfunctions.

Many big sewer pipes are old, and many of the sewage treatment plants are antiquated. But the biggest problem faced by sewer systems in California is the tiny pipe called the lateral.

That's the pipe that runs from your home to the street, the small pipes under all of our homes that end up joining the bigger sewer pipes. When those pipes develop cracks, water leaks into them.

Storm water itself would not overwhelm a sewage system, because it's designed to be a closed system. Storm water is not supposed to BE in sewer pipes. So in one way, it shouldn't even matter what the weather is like – storm water shouldn't really mix with sewage at all.

But during a rainstorm, water seeps into your broken lateral pipe, and all your neighbors' pipes, and that rainwater mixes with sewage in the sewer pipes, and the volume of water/sewage can actually build up far beyond the capacity of the sewer pipe. And in the same way, thousands and thousands of gallons of water mixed in with the sewage can swamp a treatment plant during a rainstorm.

That's the number one concern of sewage treatment plants now. And the sewer districts need your help.

Those laterals are owned by homeowners. They're on private land, so the district can't just go in there and tear them up to replace or fix them.

However, most sewer districts offer a service where they will inspect your laterals to check for leaks, and many have started programs where the district will help pay the cost of repairing or replacing those pipes.

Sewer systems are run by local municipalities. Most communities have a local sewer district, and officials at the district can help you inspect and fix your lateral pipes.

Listen to the Sewage Spills Increasing radio report online.