But even though it's in our own backyard, this place remains mostly unknown… probably due to its chilly temperatures. Let's face it, most of us are not donning our masks and snorkels and swimming in the hypothermic Pacific Ocean off our coast.

Lucky for us, some intrepid scientists and students are diving into this amazing place. Their job is to monitor how the ecosystems are responding to the new restrictions and protections taking place in the Marine Protected Areas. They gave us an amazing opportunity to see the natural world beneath the surface. And the world they shared with QUEST is truly inspiring. Playful harbor seals tease the divers while they weave through the gently swaying kelp forests. Fish dart through the rays of sunshine that cascades down to where starfish slowly go about their day. Through the eyes of these scientists, we witness the undersea life in bloom. They clearly have one of the best offices to go to work to each day.

Watch the Underwater Wilderness: Creating Marine Protected Areas television story report online.

The new FOCE experimental chamber being developed by MBARI scientists.

The scientists at the Monterey Bay Aquarium Research Institute (MBARI) are already well-known for uncovering some of the most extreme marine animals in the deep sea, like the incredible vampire squid. But recently, they're using their unique blend of biology and engineering to study one of the least-discussed impacts of climate change: ocean acidification.

When we hear about climate change, we tend of think of the atmosphere – and for good reason. But as MBARI scientists describe, the oceans are a key part of the process. The ocean acts like a giant sponge, absorbing carbon dioxide emissions from the air. And as we add more and more CO2 to air by burning fossil fuels, the ocean is absorbing it. On one level, it's done us a big favor. Scientists say that we would be experiencing much more extreme climate change were it not for the ocean's ability to remove the heat-trapping gas.

However, the carbon dioxide that the ocean absorbs is making the water more acidic. This isn't the first time that the oceans have become more acidic. But as is the case with many impacts of climate change, it's the rate at which acidification is happening that worries scientists the most.

As you can probably guess, the ocean is an incredibly complex system. So ocean acidification poses an interesting question to scientists: what will the impacts be on marine species and ecosystems? What they know already is that there will be winners and losers in more acidic waters. Some creatures may do fine, while others won't be able to adapt in time. Either way, food webs may feel the effects – including webs involving species that humans depend on , like salmon.

Another major concern has to do with marine animals with certain kinds of shells – known as "calcifiers." Corals, clams and others all use carbonate in the water to build their shells out of calcium carbonate. But ocean acidification reduces the amount of carbonate in the water, making it more difficult for them to make shells. That could be devastating for coral reefs, who are already facing a number of stresses.

Even if you're an animal without a shell, ocean acidification could make things difficult. Scientists are studying how much stress this could put on animals that can't regulate their internal pH, or how it could affect the larvae or reproduction of certain species. MBARI scientists are hoping that the flume they are developing to conduct FOCE experiments will help researchers answer some of these questions.

Check out the whole story – watch the "Acidic Seas" audio slide show online.

If you haven't read it already, see my Producer's Notes blog post for this story for the real scoop on squid.


View the web-exclusive premiere of "The Fierce Humboldt Squid," our first Season 2 QUEST TV story. Season 2 begins on broadcast TV next Tuesday, April 1 at 7:30pm on KQED, Channel 9 in Northern California.


See additional photos of these fearsome leviathans of the deep, including close-up tentacles, beaks and an actual squid necropsy.

Chris Bauer is a Segment Producer for television on QUEST, and is the producer for this story.